PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr007699.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 316aa    MW: 34733.3 Da    PI: 6.5179
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr007699.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.2e-174392255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+ +++a+  l+g
  Pbr007699.1 43 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARSYDEAACLLRG 92
                 799******.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.28243100IPR001471AP2/ERF domain
CDDcd000185.93E-314399No hitNo description
SuperFamilySSF541713.79E-1843100IPR016177DNA-binding domain
PfamPF008475.8E-124392IPR001471AP2/ERF domain
SMARTSM003809.7E-3543106IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-2743100IPR001471AP2/ERF domain
PRINTSPR003673.8E-74455IPR001471AP2/ERF domain
PRINTSPR003673.8E-76682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MEFQFQQPKQ VSFAAAGIPK SSSKVGKLKG RNNNSRSNNN ANKFVGVRQR PSGRWVAEIK  60
DTTQKIRMWL GTFETAEEAA RSYDEAACLL RGSNTRTNFI THVSMDSPLA ARIRNLLNTK  120
KGGGATKQQL ALLQRSTSTS ASSSTSSDHD HLPPPSEQLV RKSTSSTSTS SSSDTTSLSR  180
EVFQDNSLLF DDVYKPDLRN CNEEFELSSS FNNSQSNLLS WGSYQTGVDH FSFAQQAFEF  240
PKHQAAAALS SAESTTTTST AGEADSELMD FERMKVERQI SASLYAMNGV QEYMETVHDP  300
SEALWDLPPL CSLFC*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009366523.10.0PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLM5VRY31e-129M5VRY3_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g07250.t011e-106(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-39related to AP2 11